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BMC Bioinformatics

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CO-AMPPRED FOR IN SILICO-AIDED PREDICTIONS OF ANTIMICROBIAL PEPTIDES BY INTEGRATING COMPOSITION-BASED FEATURES

Antimicrobial peptides are oligopeptides that act as crucial components of innate immunity, naturally occur in all multicellular organisms,...

COPLA, A TAXONOMIC CLASSIFIER OF PLASMIDS

Plasmids are mobile genetic elements, key in the dissemination of antibiotic resistance, virulence determinants and other adaptive...

 
 
 

MATISSE: A MATLAB-BASED ANALYSIS TOOLBOX FOR IN SITU SEQUENCING EXPRESSION MAPS

A range of spatially resolved transcriptomic methods has recently emerged as a way to spatially characterize the molecular and cellular...

MUREN: A ROBUST AND MULTI-REFERENCE APPROACH OF RNA-SEQ TRANSCRIPT NORMALIZATION

Normalization of RNA-seq data aims at identifying biological expression differentiation between samples by removing the effects of...

 
 
 

MINING A STROKE KNOWLEDGE GRAPH FROM LITERATURE

Stroke has an acute onset and a high mortality rate, making it one of the most fatal diseases worldwide. Its underlying biology and...

TAXALLNOMY: AN EXTENSION OF NCBI TAXONOMY THAT PRODUCES A HIERARCHICALLY COMPLETE TAXONOMIC TREE

NCBI Taxonomy is the main taxonomic source for several bioinformatics tools and databases since all organisms with sequence accessions...

 
 
 

UNCOVERING THE EFFECTS OF HETEROGENEITY AND PARAMETER SENSITIVITY ON WITHIN-HOST DYNAMICS OF DISEASE: MALARIA AS A CASE STUDY

The fidelity and reliability of disease model predictions depend on accurate and precise descriptions of processes and determination...

A NEURAL NETWORK-BASED METHOD FOR POLYPHARMACY SIDE EFFECTS PREDICTION

Polypharmacy is a type of treatment that involves the concurrent use of multiple medications. Drugs may interact when they are used...

 
 
 

GAT-LI: A GRAPH ATTENTION NETWORK BASED LEARNING AND INTERPRETING METHOD FOR FUNCTIONAL BRAIN NETWORK CLASSIFICATION

Autism spectrum disorders imply a spectrum of symptoms rather than a single phenotype. ASD could affect brain connectivity at different...

FEATURE SELECTION FOR RNA CLEAVAGE EFFICIENCY AT SPECIFIC SITES USING THE LASSO REGRESSION MODEL IN ARABIDOPSIS THALIANA

RNA degradation is important for the regulation of gene expression. Despite the identification of proteins and sequences related to...

 
 
 

CORRECTION TO: SPEAQEASY: A SCALABLE PIPELINE FOR EXPRESSION ANALYSIS AND QUANTIFICATION FOR R/BIOCONDUCTOR‑POWERED RNA‑SEQ ANALYSES

NEODL: A NOVEL NEOANTIGEN INTRINSIC FEATURE-BASED DEEP LEARNING MODEL IDENTIFIES IDH WILD-TYPE GLIOBLASTOMAS WITH THE LONGEST SURVIVAL

Neoantigen based personalized immune therapies achieve promising results in melanoma and lung cancer, but few neoantigen based models...

 
 
 

PDBECIF: AN OPEN-SOURCE MMCIF/CIF PARSING AND PROCESSING PACKAGE

Biomacromolecular structural data outgrew the legacy Protein Data Bank format which the scientific community relied on for decades,...

PRE-CAPTURE MULTIPLEXING PROVIDES ADDITIONAL POWER TO DETECT COPY NUMBER VARIATION IN EXOME SEQUENCING

As exome sequencing integrates into clinical practice, we should make every effort to utilize all information generated. Copy-number...

 
 
 

ACCURATE PLANT PATHOGEN EFFECTOR PROTEIN CLASSIFICATION AB INITIO WITH DEEPREDEFF: AN ENSEMBLE OF CONVOLUTIONAL NEURAL NETWORKS

Plant pathogens cause billions of dollars of crop loss every year and are a major threat to global food security. Effector proteins...

HAVOC, A BIOINFORMATIC PIPELINE FOR REFERENCE-BASED CONSENSUS ASSEMBLY AND LINEAGE ASSIGNMENT FOR SARS-COV-2 SEQUENCES

SARS-CoV-2 related research has increased in importance worldwide since December 2019. Several new variants of SARS-CoV-2 have emerged...

 
 
 

MSCFS: INFERRING CIRCRNA FUNCTIONAL SIMILARITY BASED ON MULTIPLE DATA SOURCES

More and more evidence shows that circRNA plays an important role in various biological processes and human health. Therefore, inferring...

SPLICE-Q: A PYTHON TOOL FOR GENOME-WIDE QUANTIFICATION OF SPLICING EFFICIENCY

Introns are generally removed from primary transcripts to form mature RNA molecules in a post-transcriptional process called splicing....

 
 
 

MITOTOX: A COMPREHENSIVE MITOCHONDRIAL TOXICITY DATABASE

Mitochondria play essential roles in regulating cellular functions. Some drug treatments and molecular interventions have been reported...

PUBLISHER CORRECTION TO: TRANCRIPTOMERECONSTRUCTOR: DATA‑DRIVEN ANNOTATION OF COMPLEX TRANSCRIPTOMES

 
 
 



World Biotechnology Congress 2019

Hilaris Conferences is going to host its premier World Biotechnology Congress 2019 during October 01-02, 2019, Valencia, Spain. Biotechnology 2019 Congress aim to create a... Read more ...

World Biotechnology Congress 2019

Hilaris Conferences is going to host its premier World Biotechnology Congress 2019 during October 01-02, 2019, Valencia, Spain. Biotechnology 2019 Congress aim to create a... Read more ...

2nd International Conference on Tissue Science and Regenerative Medicine

This conference is designed for experts in academia and industries working in the tissue science and regenerative field, this conference will examine cutting-edge research in... Read more ...

MicroRNA-17-5p Promotes Cardiac Hypertrophy by Targeting Mfn2 to Inhibit...

Abstract Pathological cardiac hypertrophy is the leading cause of heart failure, and miRNAs have been recognized as key factors in cardiac hypertrophy. This study aimed to... Read more ...

Scientist, Hematologic and Immunologic Toxicology - La Jolla, CA - Johnson &...

As part of the cutting-edge Global Predictive, Investigative and Translational Toxicology Team, the candidate will have the opportunity to work within...From Johnson & Johnson... Read more ...

Bringing Protection Back in Line

Bringing Protection Back in Line

Research refines platform to address immune disorders Dr. Esma Yolcu and Dr. Haval Shirwan, Co-pioneers of ProtEx technology By Davis Suppes | Bond LSC The things that protect... Read more ...

After 40 Years, HIV Presents Research Problems New and Old

After 40 Years, HIV Presents Research Problems New and Old

In the years since AIDS was first described in medical research, the scientific map of that disease has changed enormously. Once it was relatively empty. Now scientists... Read more ...

Exosomal circRNA HIPK3 knockdown inhibited cell proliferation and metastasis...

Abstract Prostate cancer is the second frequent malignancy among men in the world. Exosomal circular RNAs have been reported to function in PCa progression. The current study... Read more ...

Prognostic value and immunological characteristics of a novel...

Abstract Autophagy affects the development, progression, and prognosis of various cancers including pancreatic cancer. To develop an autophagy-related prognostic model of... Read more ...

Chiral nanomaterials for tumor therapy: autophagy, apoptosis, and...

Chirality is a fundamental characteristic of natural molecules and a crucial factor in the biochemical reactions of living cells and organisms. Recently, researchers have... Read more ...

Ramil the snow leopard tests positive for COVID at the San Diego Zoo

Zoo staff say the animal's symptoms are mild and are still investigating how he got infected Read more ...

Enhanced lignin biodegradation by consortium of white rot fungi: microbial...

As one of the major components of lignocellulosic biomass, lignin has been considered as the most abundant renewable aromatic feedstock in the world. Comparing with thermal or... Read more ...

Design and heterologous expression of a novel dimeric LL37 variant in Pichia...

The antimicrobial peptide LL37 is produced by white blood cells and various epithelial cells, and has the outstanding advantages of participating in immune regulation, causing... Read more ...